The Johnson-Lindenstrauss (JL) lemma is a cornerstone of dimensionality reduction in Euclidean space, but its applicability to non-Euclidean data has remained limited. This paper extends the JL lemma beyond Euclidean geometry to handle general dissimilarity matrices that are prevalent in real-world applications. We present two complementary approaches: First, we show the JL transform can be applied to vectors in pseudo-Euclidean space with signature (p,q), providing theoretical guarantees that depend on the ratio of the (p,q)norm and Euclidean norm of two vectors, measuring the deviation from Euclidean geometry. Second, we prove that any symmetric hollow dissimilarity matrix can be represented as a matrix of generalized power distances, with an additional parameter representing the uncertainty level within the data. In this representation, applying the JL transform yields multiplicative approximation with a controlled additive error term proportional to the deviation from Euclidean geometry. Our theoretical results provide fine-grained performance analysis based on the degree to which the input data deviates from Euclidean geometry, making practical and meaningful reduction in dimensionality accessible to a wider class of data.

Federated clustering (FC) aims to discover global cluster structures across decentralized clients without sharing raw data, making privacy preservation a fundamental requirement. There are two critical challenges: (1) privacy leakage during collaboration, and (2) robustness degradation due to aggregation of proxy information from non-independent and identically distributed (Non-IID) local data, leading to inaccurate or inconsistent global clustering. Existing solutions typically rely on model-specific local proxies, which are sensitive to data heterogeneity and inherit inductive biases from their centralized counterparts, thus limiting robustness and generality. We propose Omni Federated Clustering (OmniFC), a unified and modelagnostic framework. Leveraging Lagrange coded computing, our method enables clients to share only encoded data, allowing exact reconstruction of the global distance matrix--a fundamental representation of sample relationships--without leaking private information, even under client collusion. This construction is naturally resilient to Non-IID data distributions. This approach decouples FC from model-specific proxies, providing a unified extension mechanism applicable to diverse centralized clustering methods. Theoretical analysis confirms both reconstruction fidelity and privacy guarantees, while comprehensive experiments demonstrate OmniFC's superior robustness, effectiveness, and generality across various benchmarks compared to state-of-the-art methods.

The shape of objects is an important source of visual information in a wide range of applications. One of the core challenges of shape quantification is to ensure that the extracted measurements remain invariant to transformations that preserve an object's intrinsic geometry, such as changing its size, orientation, and position in the image. In this work, we introduce ShapeEmbed, a self-supervised representation learning framework designed to encode the contour of objects in 2D images, represented as a Euclidean distance matrix, into a shape descriptor that is invariant to translation, scaling, rotation, reflection, and point indexing. Our approach overcomes the limitations of traditional shape descriptors while improving upon existing state-of-the-art autoencoder-based approaches. We demonstrate that the descriptors learned by our framework outperform their competitors in shape classification tasks on natural and biological images. We envision our approach to be of particular relevance to biological imaging applications.

Spectral clustering has gained popularity for clustering non-convex data due to its simplicity and effectiveness. It is essential to construct a similarity graph using a high-quality affinity measure that models the local neighborhood relations among the data samples. However, incomplete data can lead to inaccurate affinity measures, resulting in degraded clustering performance. To address these issues, we propose an imputation-free framework with two novel approaches to improve spectral clustering on incomplete data. Firstly, we introduce a new kernel correction method that enhances the quality of the kernel matrix estimated on incomplete data with a theoretical guarantee, benefiting classical spectral clustering on pre-defined kernels. Secondly, we develop a series of affinity learning methods that equip the selfexpressive framework with ℓp-norm to construct an intrinsic affinity matrix with an adaptive extension. Our methods outperform existing data imputation and distance calibration techniques on benchmark datasets, offering a promising solution to spectral clustering on incomplete data in various real-world applications.

Learning low-dimensional representations from multi-view relational data is challenging when underlying geometries differ across views. We propose Bary-GWMDS, a Gromov-Wasserstein-based method that operates directly on distance matrices to learn a consensus embedding preserving shared relational structure. By leveraging intrinsic distances, the approach naturally handles nonlinear distortions across views. We also introduce Mean-GWMDS-C, a clustering-oriented formulation that averages distance matrices and learns reduced-support representations via a consensus Gromov-Wasserstein transport. Experiments on synthetic and real-world datasets show that the proposed framework yields stable and geometrically meaningful embeddings.

This document supplements our main paper entitled Intrinsic Dimension, Persistent Homology and Generalization in Neural Networks as follows: (i) Sec. S1 firsts gives some of the formal definitions and interpretations omitted from the main paper due to space limitations. Next, it involves a discussion and contrasts our dimension estimator against the commonly used ones. Finally, it provides additional details into the regularizer we devised in the main paper; (ii) we then provide the complement the experimental evaluations given in the main paper and present additional studies on our synthetic diffusion data.

Multi-view data analysis seeks to integrate multiple representations of the same samples in order to recover a coherent low-dimensional structure. Classical approaches often rely on feature concatenation or explicit alignment assumptions, which become restrictive under heterogeneous geometries or nonlinear distortions. In this work, we propose two geometry-aware multi-view embedding strategies grounded in Gromov-Wasserstein (GW) optimal transport. The first, termed Mean-GWMDS, aggregates view-specific relational information by averaging distance matrices and applying GW-based multidimensional scaling to obtain a representative embedding. The second strategy, referred to as Multi-GWMDS, adopts a selection-based paradigm in which multiple geometry-consistent candidate embeddings are generated via GW-based alignment and a representative embedding is selected. Experiments on synthetic manifolds and real-world datasets show that the proposed methods effectively preserve intrinsic relational structure across views. These results highlight GW-based approaches as a flexible and principled framework for multi-view representation learning.

Understanding the distance between human languages is central to linguistics, anthropology, and tracing human evolutionary history. Yet, while linguistics has long provided rich qualitative accounts of cross-linguistic variation, a unified and scalable quantitative approach to measuring language distance remains lacking. In this paper, we introduce a method that leverages pretrained multilingual language models as systematic instruments for linguistic measurement. Specifically, we show that the spontaneously emerged attention mechanisms of these models provide a robust, tokenization-agnostic measure of cross-linguistic distance, termed Attention Transport Distance (ATD). By treating attention matrices as probability distributions and measuring their geometric divergence via optimal transport, we quantify the representational distance between languages during translation. Applying ATD to a large and diverse set of languages, we demonstrate that the resulting distances recover established linguistic groupings with high fidelity and reveal patterns aligned with geographic and contact-induced relationships. Furthermore, incorporating ATD as a regularizer improves transfer performance in low-resource machine translation. Our results establish a principled foundation for testing linguistic hypotheses using artificial neural networks. This framework transforms multilingual models into powerful tools for quantitative linguistic discovery, facilitating more equitable multilingual AI.